Commit 2f27c049 authored by Carsten Kemena's avatar Carsten Kemena

adding missing testfile

parent 962111e7
# RADS version 2.2.0
# RADS Output v1
# run at Tue Jun 26 11:18:33 2018
#
# query file: -
# database: /local/home/ckeme_01/projects/domainWorld/RADS/tests/integrationTests/interPro-test
# gap open penalty -50
# gap extension penalty -10
# matrix: /local/home/ckeme_01/.domainWorld/dsm/pfam-31.dsm
# all: false
# collapse: false
# ******************************************************************
# -------------------------------------------------------------------
Results for: manual entered query
Domain arrangement: PF00001 PF00002 PF00003
# score | normalized | SeqID | sequence length | domain arrangement | aln
# -------------------------------------------------------------------
300 1.00 test-seq1 530 PF00001 10 63 PF00002 104 312 PF00003 362 524 1
300 1.00 test-seq2 530 PF00001 10 63 PF00002 104 312 PF00003 362 524 1
190 0.69 test-seq3 530 PF00002 104 312 PF00003 362 524 2
170 0.64 test-seq5 530 PF00001 10 63 PF00002 104 312 PF00002 362 524 3
# -------------------------------------------------------------------
List of alignments:
# -------------------------------------------------------------------
1)
Query DA: PF00001 PF00002 PF00003
Target DA: PF00001 PF00002 PF00003
2)
Query DA: PF00001 PF00002 PF00003
Target DA: ******* PF00002 PF00003
3)
Query DA: ******* PF00001 PF00002 PF00003
Target DA: PF00001 PF00002 PF00002 *******
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