Commit b9f2bf63 authored by Carsten Kemena's avatar Carsten Kemena

only one window

parent 95d6a9f3
......@@ -396,7 +396,7 @@ main(int argc, char const *argv[])
domain2match[p_id] = threshold;
}
file.close();
/*
file.open(m2.string());
while(!file.eof())
{
......@@ -404,7 +404,7 @@ main(int argc, char const *argv[])
domain2match2[p_id] = threshold;
}
file.close();
*/
AlgorithmPack::Output out(outFile);
if (!noHeader)
printHeader(radiantVersion, pfamLike, translate, inFile, databaseFile, out);
......@@ -412,8 +412,8 @@ main(int argc, char const *argv[])
{
auto &assignment = assignments[i];
auto da = words2arrangement(assignment, domain2match, 10);
if (da.size() == 0)
da = words2arrangement(assignment, domain2match2, 5);
//if (da.size() == 0)
// da = words2arrangement(assignment, domain2match2, 5);
if (pfamLike)
{
......
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